Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.51■□□□□ 0.07
HCN1O60741 AC079781.4-201ENST00000641908 219 ntBASIC15.51■□□□□ 0.07
HCN1O60741 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.5■□□□□ 0.07
HCN1O60741 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 IGLL3P-201ENST00000412472 434 ntBASIC15.5■□□□□ 0.07
HCN1O60741 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.5■□□□□ 0.07
HCN1O60741 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.5■□□□□ 0.07
HCN1O60741 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.5■□□□□ 0.07
HCN1O60741 OR7E47P-204ENST00000575924 449 ntBASIC15.5■□□□□ 0.07
HCN1O60741 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HCN1O60741 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.5■□□□□ 0.07
HCN1O60741 AC007064.4-201ENST00000637740 555 ntBASIC15.5■□□□□ 0.07
HCN1O60741 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.5■□□□□ 0.07
HCN1O60741 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
HCN1O60741 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.5■□□□□ 0.07
HCN1O60741 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCN1O60741 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.49■□□□□ 0.07
HCN1O60741 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 CYP2T1P-202ENST00000641596 2535 ntBASIC15.49■□□□□ 0.07
HCN1O60741 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HCN1O60741 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 RHOQP3-201ENST00000437982 621 ntBASIC15.49■□□□□ 0.07
HCN1O60741 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 PAWRP1-201ENST00000451083 565 ntBASIC15.49■□□□□ 0.07
HCN1O60741 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.49■□□□□ 0.07
HCN1O60741 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 AL691403.2-201ENST00000618460 490 ntBASIC15.49■□□□□ 0.07
HCN1O60741 AC010507.1-201ENST00000633895 436 ntBASIC15.49■□□□□ 0.07
HCN1O60741 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCN1O60741 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HCN1O60741 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms