Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC188H7C350 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 RCN1P1-201ENST00000400413 996 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 RN7SL850P-201ENST00000579959 291 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC188H7C350 AP001269.4-201ENST00000609611 512 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 AP001350.2-201ENST00000625104 1094 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC188H7C350 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC188H7C350 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC188H7C350 AC092850.2-201ENST00000623821 2697 ntBASIC17.21■□□□□ 0.35
CCDC188H7C350 AL592424.1-201ENST00000563624 1536 ntBASIC17.21■□□□□ 0.34
CCDC188H7C350 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.21■□□□□ 0.34
CCDC188H7C350 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC188H7C350 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC188H7C350 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCDC188H7C350 AC087641.1-201ENST00000557561 1021 ntBASIC17.2■□□□□ 0.34
CCDC188H7C350 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 AL591684.3-201ENST00000605187 298 ntBASIC17.2■□□□□ 0.34
CCDC188H7C350 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCDC188H7C350 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC188H7C350 AL139288.1-201ENST00000623748 933 ntBASIC17.2■□□□□ 0.34
CCDC188H7C350 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC188H7C350 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC188H7C350 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC188H7C350 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 PRAL-201ENST00000624952 3286 ntBASIC17.19■□□□□ 0.34
CCDC188H7C350 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC188H7C350 AC099336.1-202ENST00000602961 463 ntBASIC17.19■□□□□ 0.34
CCDC188H7C350 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCDC188H7C350 PPT1-215ENST00000641471 2368 ntBASIC17.19■□□□□ 0.34
CCDC188H7C350 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms