Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC087499.5-201ENST00000452760 1342 ntBASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 AC244107.1-201ENST00000442033 332 ntBASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3BA6NDS4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3BA6NDS4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AC093724.1-201ENST00000448659 1027 ntBASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AC024267.1-201ENST00000582320 895 ntBASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3BA6NDS4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 GPAA1P2-202ENST00000606848 1787 ntBASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3BA6NDS4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms