Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DUX4L17-201ENST00000557360 1267 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 MIR1199-201ENST00000621445 119 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 MTHFR-217ENST00000641820 1569 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 AC098831.1-202ENST00000438821 336 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 Z83851.2-201ENST00000609564 659 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 AC027601.4-201ENST00000611259 610 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 GPALPP1-207ENST00000611650 899 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 AC006538.3-201ENST00000612495 578 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ME2P1-201ENST00000426028 1970 ntBASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB3Q9Y5G1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 HLA-J-202ENST00000469281 1241 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AC092910.1-201ENST00000482027 1129 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms