Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 AC007326.2-201ENST00000624224 7579 ntBASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 AC105233.2-201ENST00000523697 349 ntBASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 AF228730.5-201ENST00000530288 346 ntBASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX2IPQ9Y2D8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 AC097493.3-201ENST00000509725 367 ntBASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 AL390754.1-201ENST00000619088 582 ntBASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SSX2IPQ9Y2D8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSX2IPQ9Y2D8 FRMD8P1-201ENST00000440433 1524 ntBASIC17.77■□□□□ 0.43
SSX2IPQ9Y2D8 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.77■□□□□ 0.43
SSX2IPQ9Y2D8 AC116353.5-201ENST00000638148 1699 ntBASIC17.77■□□□□ 0.43
SSX2IPQ9Y2D8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSX2IPQ9Y2D8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX2IPQ9Y2D8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms