Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AL627223.1-201ENST00000416693 442 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 SPCS2P4-201ENST00000436160 681 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AC023141.5-201ENST00000458585 616 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 HLA-J-203ENST00000494367 1087 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AC109322.1-201ENST00000524499 1264 ntBASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLIP2Q9UDT6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 RFPL4AP1-201ENST00000530883 850 ntBASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 AL603756.1-201ENST00000606511 2163 ntBASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIP2Q9UDT6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 WASH6P-202ENST00000359512 1437 ntBASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 FAM58DP-201ENST00000428076 619 ntBASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 MIR3909-201ENST00000579518 119 ntBASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 LINC02199-201ENST00000506655 2702 ntBASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLIP2Q9UDT6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms