Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SSR1P1-201ENST00000407630 814 ntBASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AL671277.1-201ENST00000429656 993 ntBASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 GPALPP1-207ENST00000611650 899 ntBASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AC055717.3-201ENST00000622967 595 ntBASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 PCGF3-213ENST00000620529 1899 ntBASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRDM9Q9NQV7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.64■□□□□ 0.1
PRDM9Q9NQV7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 AL355306.1-201ENST00000415580 579 ntBASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 AC004967.1-201ENST00000453589 447 ntBASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 RARRES2P8-201ENST00000566335 367 ntBASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 PCDHA14-201ENST00000506751 2298 ntBASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms