Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 GPS2P2-201ENST00000430745 888 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 AC243562.1-201ENST00000560672 389 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 AC140878.1-201ENST00000565277 250 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE5Q9HCH3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 CRB3P1-201ENST00000449338 276 ntBASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 RN7SL589P-201ENST00000481268 310 ntBASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 AC008677.1-201ENST00000519230 1561 ntBASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 AC005052.1-201ENST00000625181 2492 ntBASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE5Q9HCH3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 AC140658.5-201ENST00000438532 169 ntBASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 AL135744.1-201ENST00000565098 629 ntBASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE5Q9HCH3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE5Q9HCH3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms