Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC106886.4-201ENST00000623557 2502 ntBASIC19.19■□□□□ 0.66
SLF1Q9BQI6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.19■□□□□ 0.66
SLF1Q9BQI6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 AC018529.1-201ENST00000613063 361 ntBASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 KRT8P39-201ENST00000396270 1433 ntBASIC19.18■□□□□ 0.66
SLF1Q9BQI6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 AC097493.3-201ENST00000509725 367 ntBASIC19.18■□□□□ 0.66
SLF1Q9BQI6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 FOXO1B-201ENST00000504678 1527 ntBASIC19.18■□□□□ 0.66
SLF1Q9BQI6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.18■□□□□ 0.66
SLF1Q9BQI6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLF1Q9BQI6 AC073439.1-201ENST00000624121 1774 ntBASIC19.16■□□□□ 0.66
SLF1Q9BQI6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.16■□□□□ 0.66
SLF1Q9BQI6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms