Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 LAGE3P1-201ENST00000425356 484 ntBASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBA1CQ9BQE3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 RPL13AP23-201ENST00000480739 586 ntBASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 AC002558.1-201ENST00000488906 803 ntBASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 AC105339.3-201ENST00000560043 636 ntBASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 STK25P1-201ENST00000585406 838 ntBASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1CQ9BQE3 PKD1P5-201ENST00000532415 10291 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AP002414.3-201ENST00000589352 1468 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC098831.1-202ENST00000438821 336 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 STK19B-204ENST00000512515 211 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 IGHV3-22-201ENST00000520721 359 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AL671883.3-201ENST00000603274 991 ntBASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1CQ9BQE3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms