Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RPS2P1-201ENST00000434010 821 ntBASIC16.56■□□□□ 0.24
CPNE1Q99829 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 IGHV3-65-201ENST00000523210 341 ntBASIC16.56■□□□□ 0.24
CPNE1Q99829 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.56■□□□□ 0.24
CPNE1Q99829 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.56■□□□□ 0.24
CPNE1Q99829 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.55■□□□□ 0.24
CPNE1Q99829 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 AC073648.2-201ENST00000510116 352 ntBASIC16.55■□□□□ 0.24
CPNE1Q99829 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.55■□□□□ 0.24
CPNE1Q99829 MIR1199-201ENST00000621445 119 ntBASIC16.55■□□□□ 0.24
CPNE1Q99829 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CPNE1Q99829 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE1Q99829 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE1Q99829 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE1Q99829 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 AC008735.5-201ENST00000623544 497 ntBASIC16.54■□□□□ 0.24
CPNE1Q99829 PGM5P2-202ENST00000637225 1043 ntBASIC16.54■□□□□ 0.24
CPNE1Q99829 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.54■□□□□ 0.24
CPNE1Q99829 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE1Q99829 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE1Q99829 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE1Q99829 AC012569.1-201ENST00000591191 1524 ntBASIC16.54■□□□□ 0.24
CPNE1Q99829 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms