Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 OR7E14P-202ENST00000530490 1290 ntBASIC16.26■□□□□ 0.19
NPAS2Q99743 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS2Q99743 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS2Q99743 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS2Q99743 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS2Q99743 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS2Q99743 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS2Q99743 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.25■□□□□ 0.19
NPAS2Q99743 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.25■□□□□ 0.19
NPAS2Q99743 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 DUX4L17-201ENST00000557360 1267 ntBASIC16.25■□□□□ 0.19
NPAS2Q99743 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 SIGLEC16-201ENST00000599858 1437 ntBASIC16.25■□□□□ 0.19
NPAS2Q99743 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.25■□□□□ 0.19
NPAS2Q99743 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS2Q99743 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS2Q99743 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS2Q99743 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS2Q99743 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS2Q99743 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS2Q99743 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC092384.3-202ENST00000564646 2873 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC003669.1-201ENST00000334569 611 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 MIR574-201ENST00000385209 96 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS2Q99743 KLF4P1-201ENST00000412782 1185 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC093909.1-201ENST00000504731 1122 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.24■□□□□ 0.19
NPAS2Q99743 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.24■□□□□ 0.19
NPAS2Q99743 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC107918.4-202ENST00000641623 219 ntBASIC16.24■□□□□ 0.19
NPAS2Q99743 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS2Q99743 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPAS2Q99743 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS2Q99743 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms