Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL671710.1-201ENST00000610245 2349 ntBASIC13.48□□□□□ -0.25
RAB40CQ96S21 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 AC073347.1-201ENST00000421633 2643 ntBASIC13.48□□□□□ -0.25
RAB40CQ96S21 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 CDC14C-201ENST00000428251 1719 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AL020989.1-201ENST00000422979 469 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 VENTXP7-201ENST00000475503 772 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LINC02447-202ENST00000501888 2146 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 IGHV3-41-201ENST00000613121 348 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 HYMAI.1-201ENST00000620949 238 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LINC01144-201ENST00000626198 1710 ntBASIC13.47□□□□□ -0.25
RAB40CQ96S21 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40CQ96S21 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40CQ96S21 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 AC112504.1-201ENST00000623415 1841 ntBASIC13.46□□□□□ -0.25
RAB40CQ96S21 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 AL845331.1-201ENST00000424978 1190 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms