Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDCA5Q96FF9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 GOLGA2P4-201ENST00000441462 777 ntBASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AL139099.5-201ENST00000635274 300 ntBASIC19.08■□□□□ 0.64
CDCA5Q96FF9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.08■□□□□ 0.64
CDCA5Q96FF9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.07■□□□□ 0.64
CDCA5Q96FF9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 MIR3615-201ENST00000581999 87 ntBASIC19.07■□□□□ 0.64
CDCA5Q96FF9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 AL391256.1-201ENST00000443260 1855 ntBASIC19.07■□□□□ 0.64
CDCA5Q96FF9 Z97205.2-201ENST00000564697 1639 ntBASIC19.07■□□□□ 0.64
CDCA5Q96FF9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDCA5Q96FF9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 PFN1P12-201ENST00000455938 534 ntBASIC19.06■□□□□ 0.64
CDCA5Q96FF9 AC007551.1-201ENST00000457394 519 ntBASIC19.06■□□□□ 0.64
CDCA5Q96FF9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.06■□□□□ 0.64
CDCA5Q96FF9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms