Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 CRYGEP-201ENST00000412192 528 ntBASIC17.51■□□□□ 0.39
TRIM11Q96F44 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 AP001005.1-201ENST00000571755 1248 ntBASIC17.51■□□□□ 0.39
TRIM11Q96F44 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 PCDHA1-201ENST00000378133 2726 ntBASIC17.51■□□□□ 0.39
TRIM11Q96F44 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM11Q96F44 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM11Q96F44 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 HMGA1P7-201ENST00000406908 502 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 AC009947.1-201ENST00000444350 727 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 UNC93B6-202ENST00000528242 690 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 KRT126P-201ENST00000549467 1181 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 AL049840.3-201ENST00000602669 611 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 AC116407.3-201ENST00000623905 1129 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 REXO1L8P-201ENST00000604378 1897 ntBASIC17.5■□□□□ 0.39
TRIM11Q96F44 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM11Q96F44 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM11Q96F44 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 NFIC-211ENST00000641145 8399 ntBASIC17.49■□□□□ 0.39
TRIM11Q96F44 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms