Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APH1AQ96BI3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 CNN2P11-201ENST00000429351 262 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 DNAJB3-202ENST00000449667 1266 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 KRT8P48-201ENST00000515599 1220 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 IGHV3-62-201ENST00000520057 340 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 AL513210.1-201ENST00000629608 234 ntBASIC14.66□□□□□ -0.06
APH1AQ96BI3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.66□□□□□ -0.06
APH1AQ96BI3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APH1AQ96BI3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AC079140.1-201ENST00000508039 487 ntBASIC14.65□□□□□ -0.06
APH1AQ96BI3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AC022145.2-201ENST00000598203 171 ntBASIC14.65□□□□□ -0.06
APH1AQ96BI3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.65□□□□□ -0.06
APH1AQ96BI3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APH1AQ96BI3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
APH1AQ96BI3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 PRORSD1P-202ENST00000563365 2154 ntBASIC14.64□□□□□ -0.07
APH1AQ96BI3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
APH1AQ96BI3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APH1AQ96BI3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms