Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 GPAA1P2-202ENST00000606848 1787 ntBASIC15.29■□□□□ 0.04
CNOT9Q92600 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CNOT9Q92600 CRYGEP-201ENST00000412192 528 ntBASIC15.28■□□□□ 0.04
CNOT9Q92600 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 MIR4515-201ENST00000584082 81 ntBASIC15.28■□□□□ 0.04
CNOT9Q92600 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT9Q92600 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT9Q92600 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNOT9Q92600 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT9Q92600 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 AC068418.2-201ENST00000577309 3703 ntBASIC15.27■□□□□ 0.04
CNOT9Q92600 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNOT9Q92600 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 HMGA1P7-201ENST00000406908 502 ntBASIC15.27■□□□□ 0.04
CNOT9Q92600 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT9Q92600 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.27■□□□□ 0.04
CNOT9Q92600 AL513480.1-201ENST00000451731 511 ntBASIC15.27■□□□□ 0.04
CNOT9Q92600 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT9Q92600 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.27■□□□□ 0.04
CNOT9Q92600 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT9Q92600 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.27■□□□□ 0.04
CNOT9Q92600 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.27■□□□□ 0.04
CNOT9Q92600 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CNOT9Q92600 AL121894.2-201ENST00000602977 491 ntBASIC15.27■□□□□ 0.04
CNOT9Q92600 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT9Q92600 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms