Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.49■□□□□ 0.39
UBA3Q8TBC4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AL135744.1-201ENST00000565098 629 ntBASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AL138918.1-201ENST00000568306 659 ntBASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBA3Q8TBC4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.48■□□□□ 0.39
UBA3Q8TBC4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 YBX1P5-201ENST00000509441 847 ntBASIC17.48■□□□□ 0.39
UBA3Q8TBC4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AC026120.1-201ENST00000611536 926 ntBASIC17.48■□□□□ 0.39
UBA3Q8TBC4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 AC124067.4-201ENST00000519691 2379 ntBASIC17.48■□□□□ 0.39
UBA3Q8TBC4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBA3Q8TBC4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 LINC01144-201ENST00000626198 1710 ntBASIC17.47■□□□□ 0.39
UBA3Q8TBC4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBA3Q8TBC4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms