Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC170Q8IYT3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 AC069148.1-201ENST00000608741 768 ntBASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC170Q8IYT3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 AC107918.2-201ENST00000530817 355 ntBASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 AC087388.1-201ENST00000571370 1112 ntBASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC170Q8IYT3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms