Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RP1L1Q8IWN7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 MIR658-201ENST00000385210 100 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 MTND6P24-201ENST00000440466 518 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC092552.1-201ENST00000547243 906 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC140912.1-201ENST00000577171 1054 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TEX28P1-201ENST00000613479 1221 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 TEX28P2-201ENST00000617764 1221 ntBASIC14.97□□□□□ -0.01
RP1L1Q8IWN7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 AC092658.1-201ENST00000505836 891 ntBASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 FRMD8P1-201ENST00000440433 1524 ntBASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RP1L1Q8IWN7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RP1L1Q8IWN7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RP1L1Q8IWN7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RP1L1Q8IWN7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RP1L1Q8IWN7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RP1L1Q8IWN7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.95□□□□□ -0.02
RP1L1Q8IWN7 AC008494.3-201ENST00000606615 944 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms