Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AC004890.2-204ENST00000481968 304 ntBASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AC027369.6-201ENST00000525520 931 ntBASIC18.39■□□□□ 0.53
TRIM50Q86XT4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AL138828.2-201ENST00000615812 383 ntBASIC18.39■□□□□ 0.53
TRIM50Q86XT4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 FAM220BP-201ENST00000377689 816 ntBASIC18.38■□□□□ 0.53
TRIM50Q86XT4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 TSSK5P-201ENST00000423978 907 ntBASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AC241585.1-201ENST00000433527 519 ntBASIC18.38■□□□□ 0.53
TRIM50Q86XT4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AL512638.1-201ENST00000457493 794 ntBASIC18.38■□□□□ 0.53
TRIM50Q86XT4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.38■□□□□ 0.53
TRIM50Q86XT4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM50Q86XT4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 RNF216P1-203ENST00000404404 2427 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 MRPS18AP1-201ENST00000414458 589 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 RNA5SP410-201ENST00000516285 106 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 BANF1P1-201ENST00000553684 263 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 AL139011.1-202ENST00000642063 584 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 GGT4P-201ENST00000623672 1708 ntBASIC18.37■□□□□ 0.53
TRIM50Q86XT4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms