Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM4Q86VH4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM4Q86VH4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM4Q86VH4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRTM4Q86VH4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRTM4Q86VH4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 LINC01144-201ENST00000626198 1710 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 FLJ38576-201ENST00000623820 2459 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PMS2P2-201ENST00000425039 1128 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 HLA-J-203ENST00000494367 1087 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 AC004449.1-201ENST00000564240 433 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 LINC00628-201ENST00000628516 1289 ntBASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRTM4Q86VH4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AL139400.1-201ENST00000366220 510 ntBASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC142381.1-201ENST00000426099 345 ntBASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRTM4Q86VH4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC011676.5-201ENST00000624864 2660 ntBASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRTM4Q86VH4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms