Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 POU5F1P6-201ENST00000466990 990 ntBASIC15.26■□□□□ 0.03
ZNF550Q7Z398 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 OR7E47P-204ENST00000575924 449 ntBASIC15.26■□□□□ 0.03
ZNF550Q7Z398 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 AC010327.4-202ENST00000591484 748 ntBASIC15.26■□□□□ 0.03
ZNF550Q7Z398 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 PCGF3-213ENST00000620529 1899 ntBASIC15.26■□□□□ 0.03
ZNF550Q7Z398 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF550Q7Z398 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 MTHFR-217ENST00000641820 1569 ntBASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.25■□□□□ 0.03
ZNF550Q7Z398 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 AL662844.4-201ENST00000606367 2838 ntBASIC15.25■□□□□ 0.03
ZNF550Q7Z398 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF550Q7Z398 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AL513523.2-202ENST00000427283 2040 ntBASIC15.24■□□□□ 0.03
ZNF550Q7Z398 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AC023274.1-201ENST00000418278 595 ntBASIC15.24■□□□□ 0.03
ZNF550Q7Z398 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AC064836.3-201ENST00000607928 673 ntBASIC15.24■□□□□ 0.03
ZNF550Q7Z398 ACTL9-202ENST00000612068 1252 ntBASIC15.24■□□□□ 0.03
ZNF550Q7Z398 AL645728.2-201ENST00000641974 660 ntBASIC15.24■□□□□ 0.03
ZNF550Q7Z398 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms