Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 ZNF259P1-201ENST00000407656 1365 ntBASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 AL603832.2-201ENST00000566195 2125 ntBASIC17.32■□□□□ 0.36
FOXR1Q6PIV2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 MIR7706-201ENST00000613747 67 ntBASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXR1Q6PIV2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 BX842568.4-201ENST00000421222 227 ntBASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 SCARNA2-201ENST00000458748 420 ntBASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 AL355877.3-201ENST00000622820 899 ntBASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms