Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM53Q6P2H8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 GRK6P1-201ENST00000400595 1711 ntBASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 RBM17P3-201ENST00000417687 1192 ntBASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 PMPCAP1-201ENST00000508114 1576 ntBASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AC046185.3-201ENST00000623228 1824 ntBASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 AC016396.2-201ENST00000562575 1417 ntBASIC15.26■□□□□ 0.03
TMEM53Q6P2H8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AC009336.1-201ENST00000608941 1553 ntBASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AL020989.1-201ENST00000422979 469 ntBASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 AP000867.4-201ENST00000641616 219 ntBASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM53Q6P2H8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms