Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 GGT3P-204ENST00000453783 1664 ntBASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 RNA5SP410-201ENST00000516285 106 ntBASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 AC092171.3-201ENST00000610122 2651 ntBASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SWSAP1Q6NVH7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 FLJ38576-201ENST00000623820 2459 ntBASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AC093214.1-201ENST00000511688 1107 ntBASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AC069120.2-201ENST00000524091 540 ntBASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 SPCS2P1-201ENST00000561636 679 ntBASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.34■□□□□ 0.53
SWSAP1Q6NVH7 AL589702.1-201ENST00000641229 1509 ntBASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.33■□□□□ 0.53
SWSAP1Q6NVH7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 AC097493.3-201ENST00000509725 367 ntBASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SWSAP1Q6NVH7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 LINC01144-201ENST00000626198 1710 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AC005622.1-201ENST00000636801 1703 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms