Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.88■□□□□ 0.77
RFX7Q2KHR2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 AC005052.1-201ENST00000625181 2492 ntBASIC19.87■□□□□ 0.77
RFX7Q2KHR2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 AC105233.2-201ENST00000523697 349 ntBASIC19.87■□□□□ 0.77
RFX7Q2KHR2 AF228730.5-201ENST00000530288 346 ntBASIC19.87■□□□□ 0.77
RFX7Q2KHR2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 AL592424.1-201ENST00000563624 1536 ntBASIC19.87■□□□□ 0.77
RFX7Q2KHR2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFX7Q2KHR2 HTR7P1-202ENST00000624664 4411 ntBASIC19.86■□□□□ 0.77
RFX7Q2KHR2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.86■□□□□ 0.77
RFX7Q2KHR2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.86■□□□□ 0.77
RFX7Q2KHR2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 COX20P2-201ENST00000452636 358 ntBASIC19.85■□□□□ 0.77
RFX7Q2KHR2 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.85■□□□□ 0.77
RFX7Q2KHR2 RNA5SP421-201ENST00000516864 134 ntBASIC19.85■□□□□ 0.77
RFX7Q2KHR2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 AL390754.1-201ENST00000619088 582 ntBASIC19.85■□□□□ 0.77
RFX7Q2KHR2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 AC124067.4-201ENST00000519691 2379 ntBASIC19.85■□□□□ 0.77
RFX7Q2KHR2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFX7Q2KHR2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.84■□□□□ 0.77
RFX7Q2KHR2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms