Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CU634019.7-201ENST00000624153 1185 ntBASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 FP236241.2-201ENST00000624906 1185 ntBASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.9■□□□□ 0.14
RSPO4Q2I0M5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AC138932.1-201ENST00000534164 6830 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AL162726.2-201ENST00000438986 1017 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AP000812.2-201ENST00000538934 718 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 ACTG1P17-201ENST00000558391 1119 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AC105129.2-201ENST00000559536 390 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AC092337.1-201ENST00000568699 1129 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 AC128714.1-201ENST00000637035 887 ntBASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RSPO4Q2I0M5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 REXO1L11P-201ENST00000620964 1927 ntBASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 UPF3AP2-201ENST00000457924 1132 ntBASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 MIR5572-201ENST00000583188 137 ntBASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RSPO4Q2I0M5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RSPO4Q2I0M5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RSPO4Q2I0M5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms