Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 LINC02447-202ENST00000501888 2146 ntBASIC13.69□□□□□ -0.22
SRPXP78539 AC138969.2-201ENST00000532739 9932 ntBASIC13.69□□□□□ -0.22
SRPXP78539 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 AL137013.1-201ENST00000432946 1228 ntBASIC13.69□□□□□ -0.22
SRPXP78539 KRT18P38-201ENST00000449496 1282 ntBASIC13.69□□□□□ -0.22
SRPXP78539 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.69□□□□□ -0.22
SRPXP78539 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SRPXP78539 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.69□□□□□ -0.22
SRPXP78539 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.69□□□□□ -0.22
SRPXP78539 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.69□□□□□ -0.22
SRPXP78539 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.69□□□□□ -0.22
SRPXP78539 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SRPXP78539 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SRPXP78539 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 CDC14C-201ENST00000428251 1719 ntBASIC13.69□□□□□ -0.22
SRPXP78539 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SRPXP78539 PCGF3-213ENST00000620529 1899 ntBASIC13.69□□□□□ -0.22
SRPXP78539 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.69□□□□□ -0.22
SRPXP78539 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SRPXP78539 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SRPXP78539 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 AL512652.2-201ENST00000625156 1716 ntBASIC13.68□□□□□ -0.22
SRPXP78539 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.68□□□□□ -0.22
SRPXP78539 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 AC113347.1-201ENST00000413321 391 ntBASIC13.68□□□□□ -0.22
SRPXP78539 SPDYE21P-201ENST00000413323 827 ntBASIC13.68□□□□□ -0.22
SRPXP78539 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.68□□□□□ -0.22
SRPXP78539 LINC00982-205ENST00000420957 435 ntBASIC13.68□□□□□ -0.22
SRPXP78539 AC117947.1-201ENST00000427448 529 ntBASIC13.68□□□□□ -0.22
SRPXP78539 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.68□□□□□ -0.22
SRPXP78539 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.68□□□□□ -0.22
SRPXP78539 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.68□□□□□ -0.22
SRPXP78539 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 SBF1P1-201ENST00000444527 5631 ntBASIC13.68□□□□□ -0.22
SRPXP78539 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SRPXP78539 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SRPXP78539 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SRPXP78539 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SRPXP78539 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SRPXP78539 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms