Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.57□□□□□ -0.08
SEC61A1P61619 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC002558.1-201ENST00000488906 803 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 AC093909.1-201ENST00000504731 1122 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC61A1P61619 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.57□□□□□ -0.08
SEC61A1P61619 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SEC61A1P61619 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC073592.4-201ENST00000623827 446 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 AC116407.3-201ENST00000623905 1129 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SEC61A1P61619 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 AC046185.3-201ENST00000623228 1824 ntBASIC14.57□□□□□ -0.08
SEC61A1P61619 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SEC61A1P61619 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC61A1P61619 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC61A1P61619 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 KLF4P1-201ENST00000412782 1185 ntBASIC14.56□□□□□ -0.08
SEC61A1P61619 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.56□□□□□ -0.08
SEC61A1P61619 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 AC139887.3-201ENST00000568585 713 ntBASIC14.56□□□□□ -0.08
SEC61A1P61619 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.56□□□□□ -0.08
SEC61A1P61619 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 AF228730.7-201ENST00000641842 219 ntBASIC14.56□□□□□ -0.08
SEC61A1P61619 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SEC61A1P61619 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.56□□□□□ -0.08
SEC61A1P61619 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SEC61A1P61619 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.55□□□□□ -0.08
SEC61A1P61619 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC61A1P61619 AC093525.9-201ENST00000624961 1746 ntBASIC14.55□□□□□ -0.08
SEC61A1P61619 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
SEC61A1P61619 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC61A1P61619 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms