Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 AC060834.1-201ENST00000443027 2032 ntBASIC11.68□□□□□ -0.54
CKS1BP61024 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 AC009090.5-201ENST00000624886 2285 ntBASIC11.68□□□□□ -0.54
CKS1BP61024 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 AC023908.3-201ENST00000564211 3047 ntBASIC11.68□□□□□ -0.54
CKS1BP61024 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 AC006449.5-201ENST00000610658 2098 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CKS1BP61024 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 AC079328.2-201ENST00000561241 3354 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 MMP23A-201ENST00000234610 1017 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 INGX-201ENST00000359239 846 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 SNORA78-201ENST00000459373 127 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.67□□□□□ -0.54
CKS1BP61024 AL355075.4-201ENST00000554988 638 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.67□□□□□ -0.54
CKS1BP61024 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 AL139327.4-201ENST00000612362 153 ntBASIC11.67□□□□□ -0.54
CKS1BP61024 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.67□□□□□ -0.54
CKS1BP61024 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CKS1BP61024 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.67□□□□□ -0.54
CKS1BP61024 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.67□□□□□ -0.54
CKS1BP61024 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CKS1BP61024 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CKS1BP61024 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.66□□□□□ -0.54
CKS1BP61024 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CKS1BP61024 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CKS1BP61024 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.66□□□□□ -0.54
CKS1BP61024 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms