Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
ACTBP60709 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 RN7SL606P-201ENST00000472779 293 ntBASIC14.29□□□□□ -0.12
ACTBP60709 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.29□□□□□ -0.12
ACTBP60709 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ACTBP60709 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTBP60709 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ACTBP60709 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.29□□□□□ -0.12
ACTBP60709 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.29□□□□□ -0.12
ACTBP60709 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ACTBP60709 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 CHCHD2P8-201ENST00000429873 447 ntBASIC14.28□□□□□ -0.12
ACTBP60709 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.28□□□□□ -0.12
ACTBP60709 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.28□□□□□ -0.12
ACTBP60709 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.28□□□□□ -0.12
ACTBP60709 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 AC011840.4-201ENST00000578471 627 ntBASIC14.28□□□□□ -0.12
ACTBP60709 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 KRT8P49-201ENST00000604166 1432 ntBASIC14.28□□□□□ -0.12
ACTBP60709 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 AC006277.1-201ENST00000624348 1610 ntBASIC14.28□□□□□ -0.12
ACTBP60709 AP000550.4-202ENST00000639755 178 ntBASIC14.28□□□□□ -0.12
ACTBP60709 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ACTBP60709 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ACTBP60709 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTBP60709 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTBP60709 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ACTBP60709 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ACTBP60709 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms