Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ERVFC1-1P60608 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AL603832.2-201ENST00000566195 2125 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC005089.1-201ENST00000619486 2241 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC024243.1-201ENST00000609234 778 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC009154.2-201ENST00000621177 724 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC092865.7-201ENST00000641832 219 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AC015656.1-201ENST00000624209 3578 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 FRMD8P1-201ENST00000440433 1524 ntBASIC12.92□□□□□ -0.34
ERVFC1-1P60608 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ERVFC1-1P60608 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AC005252.3-201ENST00000623855 2258 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 RCN1P1-201ENST00000400413 996 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AC113347.1-201ENST00000413321 391 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AL390955.1-201ENST00000428694 934 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 LIN28AP1-201ENST00000429574 405 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 SLC25A1P2-201ENST00000430693 912 ntBASIC12.91□□□□□ -0.34
ERVFC1-1P60608 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ERVFC1-1P60608 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms