Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 UXT-AS1-201ENST00000590504 1525 ntBASIC18.93■□□□□ 0.62
CHMP4BP1P59074 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP4BP1P59074 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 AC012569.1-201ENST00000591191 1524 ntBASIC18.92■□□□□ 0.62
CHMP4BP1P59074 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 HMGA1P7-201ENST00000406908 502 ntBASIC18.92■□□□□ 0.62
CHMP4BP1P59074 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 AC008741.2-201ENST00000612792 3115 ntBASIC18.92■□□□□ 0.62
CHMP4BP1P59074 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP4BP1P59074 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 AC060834.1-201ENST00000443027 2032 ntBASIC18.91■□□□□ 0.62
CHMP4BP1P59074 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 FAM58DP-201ENST00000428076 619 ntBASIC18.91■□□□□ 0.62
CHMP4BP1P59074 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 IGHV3-62-201ENST00000520057 340 ntBASIC18.91■□□□□ 0.62
CHMP4BP1P59074 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 AL096865.1-201ENST00000606796 927 ntBASIC18.91■□□□□ 0.62
CHMP4BP1P59074 AC009093.7-201ENST00000623853 1223 ntBASIC18.91■□□□□ 0.62
CHMP4BP1P59074 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP4BP1P59074 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
CHMP4BP1P59074 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms