Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.89■□□□□ 0.13
EPHA4P54764 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.89■□□□□ 0.13
EPHA4P54764 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.89■□□□□ 0.13
EPHA4P54764 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
EPHA4P54764 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.89■□□□□ 0.13
EPHA4P54764 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 AC097493.3-201ENST00000509725 367 ntBASIC15.89■□□□□ 0.13
EPHA4P54764 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.89■□□□□ 0.13
EPHA4P54764 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.89■□□□□ 0.13
EPHA4P54764 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 AC003101.2-201ENST00000612557 442 ntBASIC15.89■□□□□ 0.13
EPHA4P54764 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 GPAA1P2-202ENST00000606848 1787 ntBASIC15.89■□□□□ 0.13
EPHA4P54764 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA4P54764 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
EPHA4P54764 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA4P54764 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 AC006538.1-201ENST00000567905 1585 ntBASIC15.88■□□□□ 0.13
EPHA4P54764 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.88■□□□□ 0.13
EPHA4P54764 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.88■□□□□ 0.13
EPHA4P54764 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 MIR4745-201ENST00000577608 62 ntBASIC15.88■□□□□ 0.13
EPHA4P54764 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 AL390754.1-201ENST00000619088 582 ntBASIC15.88■□□□□ 0.13
EPHA4P54764 AC073592.8-201ENST00000624126 511 ntBASIC15.88■□□□□ 0.13
EPHA4P54764 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.88■□□□□ 0.13
EPHA4P54764 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.88■□□□□ 0.13
EPHA4P54764 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
EPHA4P54764 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
EPHA4P54764 AL118508.1-201ENST00000613502 2345 ntBASIC15.88■□□□□ 0.13
EPHA4P54764 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
EPHA4P54764 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.88■□□□□ 0.13
EPHA4P54764 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
EPHA4P54764 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.87■□□□□ 0.13
EPHA4P54764 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.87■□□□□ 0.13
EPHA4P54764 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHA4P54764 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHA4P54764 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 AC093724.1-201ENST00000448659 1027 ntBASIC15.87■□□□□ 0.13
EPHA4P54764 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHA4P54764 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHA4P54764 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.87■□□□□ 0.13
EPHA4P54764 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
EPHA4P54764 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.87■□□□□ 0.13
EPHA4P54764 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms