Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK7P50613 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK7P50613 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CDK7P50613 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
CDK7P50613 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CDK7P50613 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK7P50613 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK7P50613 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK7P50613 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK7P50613 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 RN7SL837P-201ENST00000463010 287 ntBASIC18.17■□□□□ 0.5
CDK7P50613 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK7P50613 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.17■□□□□ 0.5
CDK7P50613 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK7P50613 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK7P50613 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDK7P50613 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK7P50613 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK7P50613 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK7P50613 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK7P50613 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDK7P50613 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDK7P50613 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK7P50613 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDK7P50613 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.16■□□□□ 0.5
CDK7P50613 SPDYE17-201ENST00000412399 783 ntBASIC18.16■□□□□ 0.5
CDK7P50613 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.16■□□□□ 0.5
CDK7P50613 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 AC055876.2-201ENST00000531834 546 ntBASIC18.16■□□□□ 0.5
CDK7P50613 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDK7P50613 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDK7P50613 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK7P50613 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 SNX33P1-201ENST00000592116 1762 ntBASIC18.16■□□□□ 0.5
CDK7P50613 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 KRT8P12-202ENST00000472924 1397 ntBASIC18.16■□□□□ 0.5
CDK7P50613 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK7P50613 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK7P50613 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CDK7P50613 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK7P50613 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDK7P50613 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK7P50613 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK7P50613 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK7P50613 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK7P50613 AC099568.2-201ENST00000609194 695 ntBASIC18.15■□□□□ 0.5
CDK7P50613 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.15■□□□□ 0.5
CDK7P50613 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms