Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PCP4P48539 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PCP4P48539 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC11.16□□□□□ -0.62
PCP4P48539 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PCP4P48539 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.16□□□□□ -0.62
PCP4P48539 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.16□□□□□ -0.62
PCP4P48539 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 AC092139.4-201ENST00000624318 2794 ntBASIC11.16□□□□□ -0.62
PCP4P48539 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.16□□□□□ -0.62
PCP4P48539 AC110048.1-201ENST00000604293 2157 ntBASIC11.16□□□□□ -0.62
PCP4P48539 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PCP4P48539 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
PCP4P48539 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 LPP-AS2-201ENST00000605573 2852 ntBASIC11.15□□□□□ -0.62
PCP4P48539 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.15□□□□□ -0.62
PCP4P48539 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
PCP4P48539 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PCP4P48539 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
PCP4P48539 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 AC011474.4-201ENST00000623523 2076 ntBASIC11.15□□□□□ -0.62
PCP4P48539 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
PCP4P48539 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
PCP4P48539 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 AP002008.2-201ENST00000635926 4870 ntBASIC11.15□□□□□ -0.62
PCP4P48539 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PCP4P48539 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.15□□□□□ -0.62
PCP4P48539 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PCP4P48539 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
PCP4P48539 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
PCP4P48539 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 LINC00567-201ENST00000569854 3409 ntBASIC11.15□□□□□ -0.63
PCP4P48539 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.15□□□□□ -0.63
PCP4P48539 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PCP4P48539 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC11.15□□□□□ -0.63
PCP4P48539 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms