Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MMP13P45452 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.23■□□□□ 0.35
MMP13P45452 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP13P45452 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP13P45452 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 OR7E47P-204ENST00000575924 449 ntBASIC17.23■□□□□ 0.35
MMP13P45452 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP13P45452 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP13P45452 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
MMP13P45452 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP13P45452 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP13P45452 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 VN2R19P-201ENST00000442399 1052 ntBASIC17.22■□□□□ 0.35
MMP13P45452 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MMP13P45452 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP13P45452 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP13P45452 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP13P45452 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP13P45452 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP13P45452 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
MMP13P45452 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP13P45452 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP13P45452 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP13P45452 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MMP13P45452 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MMP13P45452 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 CRYGEP-201ENST00000412192 528 ntBASIC17.21■□□□□ 0.35
MMP13P45452 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.21■□□□□ 0.35
MMP13P45452 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.21■□□□□ 0.35
MMP13P45452 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 AC034105.1-201ENST00000563488 319 ntBASIC17.21■□□□□ 0.35
MMP13P45452 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.21■□□□□ 0.35
MMP13P45452 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MMP13P45452 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
MMP13P45452 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MMP13P45452 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP13P45452 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms