Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA3P29320 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA3P29320 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA3P29320 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EPHA3P29320 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EPHA3P29320 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA3P29320 CDC14C-201ENST00000428251 1719 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 NCF1C-201ENST00000438382 1427 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA3P29320 PRYP5-201ENST00000451909 266 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 AC104819.1-201ENST00000504587 486 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 AP000867.3-201ENST00000524675 377 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA3P29320 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.15■□□□□ 0.18
EPHA3P29320 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 LINC02447-202ENST00000501888 2146 ntBASIC16.15■□□□□ 0.18
EPHA3P29320 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA3P29320 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA3P29320 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
EPHA3P29320 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 GPAA1P2-202ENST00000606848 1787 ntBASIC16.14■□□□□ 0.17
EPHA3P29320 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHA3P29320 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 AC099336.1-202ENST00000602961 463 ntBASIC16.14■□□□□ 0.17
EPHA3P29320 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 AC112504.1-201ENST00000623415 1841 ntBASIC16.14■□□□□ 0.17
EPHA3P29320 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
EPHA3P29320 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA3P29320 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA3P29320 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.13■□□□□ 0.17
EPHA3P29320 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
EPHA3P29320 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 AP005117.1-201ENST00000584346 1413 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
EPHA3P29320 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
EPHA3P29320 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
EPHA3P29320 NUS1P2-201ENST00000417358 873 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms