Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.23□□□□□ -0.13
CD40P25942 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD40P25942 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD40P25942 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 MIR943-201ENST00000401286 94 ntBASIC14.23□□□□□ -0.13
CD40P25942 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.23□□□□□ -0.13
CD40P25942 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.23□□□□□ -0.13
CD40P25942 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.23□□□□□ -0.13
CD40P25942 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 MIR4453-201ENST00000584019 89 ntBASIC14.23□□□□□ -0.13
CD40P25942 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.23□□□□□ -0.13
CD40P25942 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40P25942 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 AC012313.1-201ENST00000593393 3059 ntBASIC14.23□□□□□ -0.13
CD40P25942 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40P25942 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 GGT4P-201ENST00000623672 1708 ntBASIC14.22□□□□□ -0.13
CD40P25942 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 FAM220BP-201ENST00000377689 816 ntBASIC14.22□□□□□ -0.13
CD40P25942 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 AC055876.3-201ENST00000431496 288 ntBASIC14.22□□□□□ -0.13
CD40P25942 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.22□□□□□ -0.13
CD40P25942 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.22□□□□□ -0.13
CD40P25942 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.22□□□□□ -0.13
CD40P25942 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.22□□□□□ -0.13
CD40P25942 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 AC138649.4-201ENST00000612222 287 ntBASIC14.22□□□□□ -0.13
CD40P25942 AC003101.2-201ENST00000612557 442 ntBASIC14.22□□□□□ -0.13
CD40P25942 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD40P25942 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40P25942 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD40P25942 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40P25942 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40P25942 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
CD40P25942 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40P25942 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40P25942 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms