Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP11P24347 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP11P24347 RNU1-129P-201ENST00000384064 167 ntBASIC15.71■□□□□ 0.11
MMP11P24347 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP11P24347 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP11P24347 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MMP11P24347 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP11P24347 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
MMP11P24347 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.71■□□□□ 0.11
MMP11P24347 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MMP11P24347 AC243562.1-201ENST00000560672 389 ntBASIC15.71■□□□□ 0.11
MMP11P24347 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP11P24347 U1.21-201ENST00000580816 167 ntBASIC15.71■□□□□ 0.11
MMP11P24347 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.71■□□□□ 0.11
MMP11P24347 AC106028.4-201ENST00000614509 607 ntBASIC15.71■□□□□ 0.11
MMP11P24347 LINC00628-201ENST00000628516 1289 ntBASIC15.71■□□□□ 0.11
MMP11P24347 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP11P24347 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MMP11P24347 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MMP11P24347 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
MMP11P24347 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.71■□□□□ 0.1
MMP11P24347 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP11P24347 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.71■□□□□ 0.1
MMP11P24347 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP11P24347 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.71■□□□□ 0.1
MMP11P24347 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP11P24347 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.71■□□□□ 0.1
MMP11P24347 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.7■□□□□ 0.1
MMP11P24347 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
MMP11P24347 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 PMS2P4-201ENST00000412466 1052 ntBASIC15.7■□□□□ 0.1
MMP11P24347 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.7■□□□□ 0.1
MMP11P24347 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP11P24347 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 AC093520.2-201ENST00000561830 333 ntBASIC15.7■□□□□ 0.1
MMP11P24347 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP11P24347 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 AL031055.1-201ENST00000606362 631 ntBASIC15.7■□□□□ 0.1
MMP11P24347 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
MMP11P24347 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP11P24347 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP11P24347 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP11P24347 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP11P24347 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP11P24347 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MMP11P24347 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP11P24347 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP11P24347 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MMP11P24347 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
MMP11P24347 AL662844.4-201ENST00000606367 2838 ntBASIC15.69■□□□□ 0.1
MMP11P24347 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP11P24347 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP11P24347 AC046158.3-201ENST00000624947 2558 ntBASIC15.69■□□□□ 0.1
MMP11P24347 WASH6P-202ENST00000359512 1437 ntBASIC15.68■□□□□ 0.1
MMP11P24347 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MMP11P24347 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms