Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PPP3CBP16298 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PPP3CBP16298 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PPP3CBP16298 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP3CBP16298 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP3CBP16298 PMS2P2-201ENST00000425039 1128 ntBASIC14.9□□□□□ -0.02
PPP3CBP16298 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 AC112191.1-201ENST00000523689 701 ntBASIC14.9□□□□□ -0.02
PPP3CBP16298 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP3CBP16298 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP3CBP16298 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PPP3CBP16298 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP3CBP16298 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PPP3CBP16298 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
PPP3CBP16298 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.89□□□□□ -0.03
PPP3CBP16298 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.89□□□□□ -0.03
PPP3CBP16298 FAM58CP-201ENST00000435741 640 ntBASIC14.89□□□□□ -0.03
PPP3CBP16298 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.89□□□□□ -0.03
PPP3CBP16298 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
PPP3CBP16298 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PPP3CBP16298 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP3CBP16298 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
PPP3CBP16298 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PPP3CBP16298 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PPP3CBP16298 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PPP3CBP16298 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPP3CBP16298 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPP3CBP16298 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms