Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CD3DP04234 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD3DP04234 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD3DP04234 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD3DP04234 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
CD3DP04234 AC148477.5-201ENST00000625164 1645 ntBASIC14.08□□□□□ -0.15
CD3DP04234 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CD3DP04234 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD3DP04234 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 AC069224.1-201ENST00000566372 1715 ntBASIC14.08□□□□□ -0.16
CD3DP04234 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 KRT18P38-201ENST00000449496 1282 ntBASIC14.08□□□□□ -0.16
CD3DP04234 SIGLEC30P-201ENST00000455569 941 ntBASIC14.08□□□□□ -0.16
CD3DP04234 YBX1P2-201ENST00000489612 999 ntBASIC14.08□□□□□ -0.16
CD3DP04234 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.08□□□□□ -0.16
CD3DP04234 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.08□□□□□ -0.16
CD3DP04234 MIR4497-201ENST00000583208 89 ntBASIC14.08□□□□□ -0.16
CD3DP04234 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 AC139887.4-201ENST00000607877 719 ntBASIC14.08□□□□□ -0.16
CD3DP04234 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD3DP04234 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CD3DP04234 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.08□□□□□ -0.16
CD3DP04234 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD3DP04234 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.07□□□□□ -0.16
CD3DP04234 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 AP003680.1-201ENST00000598970 3660 ntBASIC14.07□□□□□ -0.16
CD3DP04234 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.07□□□□□ -0.16
CD3DP04234 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.07□□□□□ -0.16
CD3DP04234 AC112907.2-201ENST00000448639 330 ntBASIC14.07□□□□□ -0.16
CD3DP04234 POU5F1P6-201ENST00000466990 990 ntBASIC14.07□□□□□ -0.16
CD3DP04234 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.07□□□□□ -0.16
CD3DP04234 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.07□□□□□ -0.16
CD3DP04234 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.07□□□□□ -0.16
CD3DP04234 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.07□□□□□ -0.16
CD3DP04234 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.07□□□□□ -0.16
CD3DP04234 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.07□□□□□ -0.16
CD3DP04234 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD3DP04234 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 AC243591.1-201ENST00000452967 1364 ntBASIC14.07□□□□□ -0.16
CD3DP04234 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.07□□□□□ -0.16
CD3DP04234 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD3DP04234 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD3DP04234 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD3DP04234 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD3DP04234 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.06□□□□□ -0.16
CD3DP04234 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.06□□□□□ -0.16
CD3DP04234 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms