Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PMS2P1-201ENST00000431037 1228 ntBASIC17.18■□□□□ 0.34
IFNB1P01574 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.18■□□□□ 0.34
IFNB1P01574 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 AC091167.2-201ENST00000579581 588 ntBASIC17.18■□□□□ 0.34
IFNB1P01574 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.18■□□□□ 0.34
IFNB1P01574 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 AL596087.1-201ENST00000400979 1969 ntBASIC17.18■□□□□ 0.34
IFNB1P01574 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.18■□□□□ 0.34
IFNB1P01574 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
IFNB1P01574 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
IFNB1P01574 SLC22A20-204ENST00000530038 1673 ntBASIC17.17■□□□□ 0.34
IFNB1P01574 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IFNB1P01574 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.17■□□□□ 0.34
IFNB1P01574 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.17■□□□□ 0.34
IFNB1P01574 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
IFNB1P01574 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 AC012313.10-201ENST00000623509 926 ntBASIC17.17■□□□□ 0.34
IFNB1P01574 AC107918.4-202ENST00000641623 219 ntBASIC17.17■□□□□ 0.34
IFNB1P01574 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
IFNB1P01574 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.17■□□□□ 0.34
IFNB1P01574 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFNB1P01574 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
IFNB1P01574 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.16■□□□□ 0.34
IFNB1P01574 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.16■□□□□ 0.34
IFNB1P01574 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.16■□□□□ 0.34
IFNB1P01574 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.16■□□□□ 0.34
IFNB1P01574 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFNB1P01574 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.16■□□□□ 0.34
IFNB1P01574 RPS15P9-201ENST00000494093 319 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms