Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AP001005.1-201ENST00000571755 1248 ntBASIC16.67■□□□□ 0.26
VAPBO95292 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 MTHFR-217ENST00000641820 1569 ntBASIC16.67■□□□□ 0.26
VAPBO95292 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.67■□□□□ 0.26
VAPBO95292 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.66■□□□□ 0.26
VAPBO95292 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.66■□□□□ 0.26
VAPBO95292 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 CXCL1P1-201ENST00000502804 216 ntBASIC16.66■□□□□ 0.26
VAPBO95292 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.66■□□□□ 0.26
VAPBO95292 UNC93B6-202ENST00000528242 690 ntBASIC16.66■□□□□ 0.26
VAPBO95292 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.66■□□□□ 0.26
VAPBO95292 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VAPBO95292 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.66■□□□□ 0.26
VAPBO95292 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
VAPBO95292 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPBO95292 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
VAPBO95292 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 AC009947.1-201ENST00000444350 727 ntBASIC16.65■□□□□ 0.26
VAPBO95292 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
VAPBO95292 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 MIR4515-201ENST00000584082 81 ntBASIC16.65■□□□□ 0.26
VAPBO95292 SLC25A6P4-201ENST00000586535 553 ntBASIC16.65■□□□□ 0.26
VAPBO95292 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.65■□□□□ 0.26
VAPBO95292 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 AL596257.1-201ENST00000641463 2694 ntBASIC16.65■□□□□ 0.26
VAPBO95292 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms