Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 AP3S2-216ENST00000617003 1561 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDH8O95206 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH8O95206 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 AC055876.3-201ENST00000431496 288 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 RNA5SP421-201ENST00000516864 134 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 RARRES2P9-201ENST00000565168 469 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH8O95206 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH8O95206 LINC02084-201ENST00000606069 1096 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 AL096865.1-201ENST00000606796 927 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 AC138649.4-201ENST00000612222 287 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDH8O95206 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 AC005915.1-201ENST00000624912 2018 ntBASIC16.5■□□□□ 0.23
PCDH8O95206 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH8O95206 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH8O95206 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH8O95206 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH8O95206 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDH8O95206 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDH8O95206 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH8O95206 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH8O95206 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH8O95206 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH8O95206 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH8O95206 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH8O95206 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH8O95206 TREML5P-201ENST00000421694 576 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 BASP1P1-201ENST00000430708 665 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH8O95206 BCRP1-201ENST00000444246 691 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH8O95206 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH8O95206 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH8O95206 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH8O95206 MIR3197-201ENST00000582241 73 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 AL390955.2-201ENST00000603032 514 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH8O95206 AL512652.2-201ENST00000625156 1716 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 FO538757.1-201ENST00000623083 1397 ntBASIC16.49■□□□□ 0.23
PCDH8O95206 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH8O95206 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms