Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 AC027307.2-201ENST00000591252 911 ntBASIC17.45■□□□□ 0.38
RTN3O95197 AC084121.4-201ENST00000641598 221 ntBASIC17.45■□□□□ 0.38
RTN3O95197 AF228730.8-201ENST00000642140 221 ntBASIC17.45■□□□□ 0.38
RTN3O95197 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 UXT-AS1-201ENST00000590504 1525 ntBASIC17.45■□□□□ 0.38
RTN3O95197 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 AL645728.1-201ENST00000366221 2101 ntBASIC17.45■□□□□ 0.38
RTN3O95197 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RTN3O95197 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
RTN3O95197 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 OR6D1P-203ENST00000641209 4860 ntBASIC17.44■□□□□ 0.38
RTN3O95197 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 AL645939.2-201ENST00000427340 991 ntBASIC17.44■□□□□ 0.38
RTN3O95197 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN3O95197 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 AC025678.2-201ENST00000562061 970 ntBASIC17.44■□□□□ 0.38
RTN3O95197 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN3O95197 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.44■□□□□ 0.38
RTN3O95197 LINC00628-201ENST00000628516 1289 ntBASIC17.44■□□□□ 0.38
RTN3O95197 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN3O95197 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN3O95197 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN3O95197 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.44■□□□□ 0.38
RTN3O95197 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN3O95197 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN3O95197 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN3O95197 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN3O95197 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN3O95197 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.43■□□□□ 0.38
RTN3O95197 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN3O95197 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTN3O95197 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN3O95197 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN3O95197 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms