Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH16O75309 AL121672.3-201ENST00000608644 468 ntBASIC16.77■□□□□ 0.28
CDH16O75309 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH16O75309 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH16O75309 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH16O75309 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH16O75309 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH16O75309 AC099063.4-201ENST00000641099 1602 ntBASIC16.77■□□□□ 0.27
CDH16O75309 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH16O75309 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH16O75309 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH16O75309 IER3-202ENST00000376377 1350 ntBASIC16.77■□□□□ 0.27
CDH16O75309 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH16O75309 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 AC005332.1-201ENST00000577698 1310 ntBASIC16.76■□□□□ 0.27
CDH16O75309 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH16O75309 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDH16O75309 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH16O75309 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 AC114341.1-201ENST00000618070 349 ntBASIC16.76■□□□□ 0.27
CDH16O75309 AC116407.4-201ENST00000623319 1061 ntBASIC16.76■□□□□ 0.27
CDH16O75309 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH16O75309 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDH16O75309 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH16O75309 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDH16O75309 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 MIR648-201ENST00000385046 94 ntBASIC16.75■□□□□ 0.27
CDH16O75309 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH16O75309 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CDH16O75309 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 AC010654.1-201ENST00000615722 808 ntBASIC16.75■□□□□ 0.27
CDH16O75309 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH16O75309 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH16O75309 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH16O75309 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH16O75309 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH16O75309 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH16O75309 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH16O75309 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms