Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 ME2P1-201ENST00000426028 1970 ntBASIC14.84□□□□□ -0.03
ZIC3O60481 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 AC005052.1-201ENST00000625181 2492 ntBASIC14.84□□□□□ -0.03
ZIC3O60481 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 AL589702.1-201ENST00000641229 1509 ntBASIC14.84□□□□□ -0.03
ZIC3O60481 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.84□□□□□ -0.03
ZIC3O60481 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 SPDYE14P-201ENST00000442619 822 ntBASIC14.84□□□□□ -0.03
ZIC3O60481 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.84□□□□□ -0.03
ZIC3O60481 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.84□□□□□ -0.03
ZIC3O60481 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.84□□□□□ -0.03
ZIC3O60481 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZIC3O60481 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZIC3O60481 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC3O60481 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC3O60481 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ZIC3O60481 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.83□□□□□ -0.03
ZIC3O60481 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC3O60481 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
ZIC3O60481 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC3O60481 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZIC3O60481 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC3O60481 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.83□□□□□ -0.04
ZIC3O60481 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ZIC3O60481 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZIC3O60481 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.83□□□□□ -0.04
ZIC3O60481 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.83□□□□□ -0.04
ZIC3O60481 AL645939.2-201ENST00000427340 991 ntBASIC14.83□□□□□ -0.04
ZIC3O60481 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZIC3O60481 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC3O60481 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ZIC3O60481 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
ZIC3O60481 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.83□□□□□ -0.04
ZIC3O60481 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZIC3O60481 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 PCDHA14-201ENST00000506751 2298 ntBASIC14.82□□□□□ -0.04
ZIC3O60481 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZIC3O60481 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZIC3O60481 FAM220BP-201ENST00000377689 816 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms