Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC105021.1-202ENST00000570572 669 ntBASIC15.79■□□□□ 0.12
DUX1O43812 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.79■□□□□ 0.12
DUX1O43812 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.79■□□□□ 0.12
DUX1O43812 LINC02560-201ENST00000596379 459 ntBASIC15.79■□□□□ 0.12
DUX1O43812 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.79■□□□□ 0.12
DUX1O43812 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 AC008761.3-201ENST00000624803 892 ntBASIC15.79■□□□□ 0.12
DUX1O43812 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.79■□□□□ 0.12
DUX1O43812 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
DUX1O43812 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.79■□□□□ 0.12
DUX1O43812 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
DUX1O43812 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX1O43812 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.78■□□□□ 0.12
DUX1O43812 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.78■□□□□ 0.12
DUX1O43812 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.78■□□□□ 0.12
DUX1O43812 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
DUX1O43812 RN7SL828P-201ENST00000607615 303 ntBASIC15.78■□□□□ 0.12
DUX1O43812 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.78■□□□□ 0.12
DUX1O43812 AC009118.2-201ENST00000613275 655 ntBASIC15.78■□□□□ 0.12
DUX1O43812 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.78■□□□□ 0.12
DUX1O43812 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.78■□□□□ 0.12
DUX1O43812 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.78■□□□□ 0.12
DUX1O43812 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 AC022144.1-201ENST00000602255 1580 ntBASIC15.78■□□□□ 0.12
DUX1O43812 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.78■□□□□ 0.12
DUX1O43812 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUX1O43812 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
DUX1O43812 AL603756.1-201ENST00000606511 2163 ntBASIC15.77■□□□□ 0.12
DUX1O43812 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
DUX1O43812 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.77■□□□□ 0.12
DUX1O43812 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.77■□□□□ 0.12
DUX1O43812 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
DUX1O43812 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
DUX1O43812 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.77■□□□□ 0.12
DUX1O43812 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.77■□□□□ 0.12
DUX1O43812 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
DUX1O43812 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.77■□□□□ 0.12
DUX1O43812 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUX1O43812 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.77■□□□□ 0.12
DUX1O43812 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 AL645608.8-201ENST00000606034 2086 ntBASIC15.77■□□□□ 0.11
DUX1O43812 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.77■□□□□ 0.11
DUX1O43812 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.77■□□□□ 0.11
DUX1O43812 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
DUX1O43812 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 GGT4P-201ENST00000623672 1708 ntBASIC15.77■□□□□ 0.11
DUX1O43812 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUX1O43812 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DUX1O43812 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DUX1O43812 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
DUX1O43812 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DUX1O43812 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms